fsl_feat

qx_utilities.processing.fsl.fsl_feat(sinfo, options, overwrite=False, thread=0)

fsl_feat [... processing options]

This command executes FSL's feat software tool for high quality model-based FMRI data analysis.

Parameters

--batchfile (str, default ''):

The batch.txt file with all the sessions information.

--sessions (str, default ''):

A list of sessions to process.

--sessionsfolder (str, default '.'):

The path to the study/sessions folder, where the imaging data is supposed to go.

--parsessions (int, default 1):

How many sessions to run in parallel.

--logfolder (str, default ''):

The path to the folder where runlogs and comlogs are to be stored, if other than default.

--feat_file (str, default ''):

Path to the feat file. If an absolute path is provided all sessions will be processed using the same feat file. If a relative path is provided, QuNex will look for the feat file inside each session's folder.

Examples

qunex fsl_feat \
    --feat_file="feat.fsf" \
    --sessionsfolder="/data/qunex_study/sessions" \
    --sessions="OP207,OP208" \
    --parsessions=2

qunex fsl_feat \
    --feat_file="/data/qunex_study/info/feat.fsf" \
    --sessionsfolder="/data/qunex_study/sessions" \
    --sessions="OP207,OP208" \
    --parsessions=2